| Differential Evolution - A Simple and Efficient Adaptive Scheme for Global Optimization Over Continuous Spaces | R. Storn and K. Price | ICSI Technical Report TR-95-012 | March 1995 | ICSI Technical Reports | [PDF]
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| Modeling and Optimization of PET-Redundancy Assignment for MPEG Sequences | R. Storn | ICSI Technical Report TR-95-018 | May 1995 | ICSI Technical Reports | [PDF]
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| Differential Evolution Design of an IIR-Filter with Requirements for Magnitude and Group Delay | R. Storn | ICSI Technical Report TR-95-026 | June 1995 | ICSI Technical Reports | [PDF]
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| Efficient Input Reordering for the DCT Based on a Real-Valued Decimation in Time FFT | R. Storn | ICSI Technical Report TR-95-061 | September 1995 | ICSI Technical Reports | [PDF]
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| Stream Control Transmission Protocol | R. Stewart, Q. Xie, K. Morneault, C. Sharp, H. Schwarzbauer, T. Taylor, I. Rytina, M. Kalla, L. Zhang, and V. Paxson | Request for Comments 2960, Proposed Standard, October 2000. | October 2000 | Networking | |
| Genome-Wide Association Data Reveal a Global Map of Genetic Interactions among Protein Complexes | R. Srivas, G. Hannum, A. Guénolé, H. van Attikum, N. J. Krogan, R. M. Karp, and T. Ideker | Presented at the 18th Annual International Conference on Intelligent Systems for Molecular Biology (ISMB 2010), Boston, Massachusetts | July 2010 | Algorithms | |
| An Architecture for Exploiting Multi-Core Processors to Parallelize Network Intrusion Prevention | R. Sommer, N. Weaver, and V. Paxson | Concurrency and Computation: Practice and Experience, Vol. 21, Issue 10, pp. 1255-1279 | July 2009 | Networking | [PDF]
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| HILTI: An Abstract Execution Environment for High-Performance Network Traffic Analysis | R. Sommer, N. Weaver, and V. Paxson | ICSI Technical Report TR-10-003 | February 2010 | ICSI Technical Reports | [PDF]
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| HILTI: An Abstract Execution Environment for Concurrent, Stateful Network Traffic Analysis | R. Sommer, L. De Carli, N. Kothari, M. Vallentin, and V. Paxson | ICSI Technical Report TR-12-003 | January 2012 | ICSI Technical Reports | [PDF]
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| Enhancing Byte-Level Network Intrusion Detection Signatures with Context | R. Sommer and V. Paxson | Proceedings of ACM CCS | 2003 | Networking | |
| Exploiting Independent State For Network Intrusion Detection | R. Sommer and V. Paxson | Technische Universität München Technical Report No. TUM-I0420, Munich, Germany | November 2004 | Networking | [PDF]
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| Exploiting Independent State For Network Intrusion Detection | R. Sommer and V. Paxson | Proceedings of the 21st Annual Computer Security Applications Conference (ACSAC 2005), Tucson, Arizona, pp. 59-71 | December 2005 | Networking | [PDF]
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| Outside the Closed World: On Using Machine Learning for Network Intrusion Detection | R. Sommer and V. Paxson | Proceedings of the IEEE Symposium on Security and Privacy 2010, Oakland, California, pp. 305-316 | May 2010 | Networking | [PDF]
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| Temporal Constraints on Speech Intelligibility as Deduced From Exceedingly Sparse Spectral Representations | R. Silipo, S. Greenberg, and T. Arai | Proceedings of the 6th European Conference on Speech Communication and Technology (Eurospeech '99), Budapest, Hungary, pp. VI-2687-2690 | September 1999 | Speech | [PDF]
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| Automatic Detection of Prosodic Stress in American English Discourse | R. Silipo and S. Greenberg | ICSI Technical Report TR-00-001 | March 2000 | ICSI Technical Reports | [PDF]
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| Prosodic Stress Revisited: Reassessing the Fole of Fundamental Frequency | R. Silipo and S. Greenberg | Proceedings of the National Institute of Standards and Technology Speech Transcription Workshop, College Park, Maryland | May 2000 | Speech | [PDF]
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| Automatic Transcription of Prosodic Stress for Spontaneous English Discourse | R. Silipo and S. Greenberg | Proceedings of the International Congress of Phonetic Sciences, San Francisco, California, Vol. 3, pp. 2351-2354 | August 1999 | Speech | [PDF]
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| Acoustic Stress and Topic Detection in American English Spoken Sentences | R. Silipo and F. Crestani | ICSI Technical Report TR-00-005 | March 2000 | ICSI Technical Reports | [PDF]
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| Identification of Protein Complexes by Comparative Analysis of Yeast and Bacterial Protein Interaction Data | R. Sharan, T. Ideker, B.P. Kelley, R. Shamir, and R.M. Karp | Proceedings of RECOMB 2004, pp. 282-289 | January 05 2004 | Networking | |
| Identification of Protein Complexes by Comparative Analysis of Yeast and Bacterial Protein Interaction Data | R. Sharan, T. Ideker, B. P. Kelley, R. Shamir, and R. M. Karp | Journal of Computational Biology, Vol. 12, Issue 6, pp. 835-846; also in Proceedings of the 8th Annual International Conference on Research in Computational Molecular Biology (RECOMB'04), San Diego, California, pp. 282-289, March 2004 | July 2005 | Algorithms | |
| Identification of Protein Complexes by Comparative Analysis of Yeast and Bacterial Protein Interaction Data | R. Sharan, T. Ideker, B. Kelley, R. Shamir, and R. M. Karp | ICSI Technical Report TR-03-003 | September 2003 | ICSI Technical Reports | [PDF]
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| Conserved Patterns of Protein Interaction in Multiple Species | R. Sharan, S. Sutharan, R. Kelley, T. Kuhn, S. McCuine, T.Sittler, R. Karp, and T. Ideker | Proceedings of National Academy of Science, Vol. 102, Issue 6, pp. 1974-1979 | February 2005 | Algorithms | [PDF]
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| CRÈME: A Framework for Identifying Cis-Regulatory Modules in Human-Mouse Conserved Segments | R. Sharan, I. Ovcharenko, A. Ben-Hur, and R. M. Karp | Proceedings of the Eleventh International Conference on Intelligent Systems for Molecular Biology (ISMB'03), Bioinformatics 19, Supplement 1, pp. 1283-1291 | 2003 | Algorithms | |
| CLICK and EXPANDER: A System for Clustering and Visualizing Gene Expression Data | R. Sharan, A. Maron-Katz, and R. Shamir | Bioinformatics, 19, pp. 1787-1799 | 2003 | Algorithms | |
| CREME: Cis-Regulatory Module Explorer for the Human Genome | R. Sharan, A. Ben-Hur, G.G. Loots, and I. Ovcharenko | Nucleic Acids Research 32, pp. W253-W256 | January 05 2004 | Algorithms | |
| Multiplexing Schemes for Generic SNP Genotyping Assays | R. Sharan, A. Ben-Dor, and Z. Yakhini | Proceedings of PSB'04, pp. 140-151 | January 05 2004 | Algorithms | |
| Reconstructing Boolean Models of Signaling | R. Sharan and R. M. Karp | Proceedings of the 16th Annual International Conference on Research in Computational Molecular Biology (RECOMB 2012), Barcelona, Spain, pp. 261-271 | April 2012 | Algorithms | |
| Cluster Graph Modification Problems | R. Shamir, R. Sharan, and D. Tsur | Discrete Applied Mathematics | January 05 2004 | Algorithms | |
| Optimal Fully Dynamic Algorithms for Cograph Recognition | R. Shamir and R. Sharan | Discrete Applied Mathematics 136, pp. 329-340 | January 05 2004 | Algorithms | |
| Backwards Analysis of Randomized Geometric Algorithms | R. Seidel | ICSI Technical Report TR-92-014 | February 1992 | ICSI Technical Reports | [PDF]
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| Introduction to the Special Issue on Processing Morphologically Rich Languages | R. Sarikaya, K. Kirchhoff, T. Schultz, and D. Hakkani-Tür | IEEE Transactions on Audio, Speech and Language Processing, Special Issue on Processing Morphologically Rich Languages, Vol. 17, No. 5, pp. 861-862 | July 2009 | Speech | [PDF]
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| Reorganization in Persistent Object Stores | R. Salama, L. Wegner, and J. Thamm | ICSI Technical Report TR-97-023 | May 1997 | ICSI Technical Reports | [PDF]
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| Output Sets, Halting Sets and an Arithmetical Hierarchy for Ordered Subrings of the Real Number Under Blum/Shub/Smale Computation | R. S. John | ICSI Technical Report TR-94-035 | August 1994 | ICSI Technical Reports | [PDF]
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| Designing Checkers for Programs that Run in Parallel | R. Rubinfeld | ICSI Technical Report TR-90-040 | August 1990 | ICSI Technical Reports | [PDF]
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| A Mathematical Theory of Self-Checking, Self-Testing and Self-Correcting Programs (Thesis) | R. Rubinfeld | ICSI Technical Report TR-90-054 | October 1990 | ICSI Technical Reports | [PDF]
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| MGMR: Leveraging RNA-Seq Population Data to Optimize Expression Estimation | R. Rozov, E. Halperin, and R. Shamir | Proceedings of the Second Annual Satellite Workshop on Massively Parallel Sequencing at the 16th Annual International Conference on Research in Computational Molecular Biology (RECOMB 2012), Barcelona, Spain. Published in BMC Bioinformatics, Vol. 13, Suppl. 6:S2 | April 2012 | Algorithms | [PDF]
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| miRNAkey: A Software for microRNA Deep Sequencing Analysis | R. Ronen, I. Gan, S. Modai, A. Sukacheov, G. Dror, E. Halperin, and N. Shomron | Bioinformatics, Vol. 26, Issue 20, pp. 2615-2616 | October 2010 | Algorithms | |
| Second Order Backpropagation - Efficient Computation of the Hessian Matrix for Neural Networks | R. Rojas | ICSI Technical Report TR-93-057 | September 1993 | ICSI Technical Reports | [PDF]
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| Media Coverage of Online Social Network Privacy Issues in Germany - A Thematic Analysis | R. Rizk, D. Marx, M. Schrepfer, J. Zimmermann, and O. Günther | Proceedings of the 15th Americas Conference on Information Systems (AMCIS 2009), San Francisco, California, paper 342 | August 2009 | Other | [PDF]
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| Proxy Caching Mechanism for Multimedia Playback Streams in the Internet | R. Rejaie, M. Handley, H. Yu, and D. Estrin | Proceedings of the Fourth International Web Caching Workshop, San Diego, California, March 31 - April 2, 1999. | March 1999 | Networking | |
| Quality Adaptation for Congestion Controlled Playback Video Over the Internet | R. Rejaie, M. Handley, and D. Estrin | Proceedings of ACM SIGCOMM '99, Cambridge, September 1999. | September 1999 | Networking | |
| RAP: An End-to-End Rate-Based Congestion Control Mechanism for Realtime Streams in the Internet | R. Rejaie, M. Handley, and D. Estrin | Proceedings of Infocom 1999. | 1999 | Networking | |
| Architectural Considerations for Playback of Quality Adaptive Video over the Internet | R. Rejaie, M. Handley, and D. Estrin | Technical report 98-686, Computer Science Department, University of Southern California | 1998 | Networking | |
| Multimedia Proxy Caching for Quality Adaptive Streaming Applications in the Internet | R. Rejaie, H. Yu, M. Handley, and D. Estrin | Proceedings of Infocom 2000. | 2000 | Networking | |
| Fast Evaluation of Boolean Formulas by CREW-PRAMs | R. Reischuk | ICSI Technical Report TR-89-054 | September 1989 | ICSI Technical Reports | [PDF]
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| Precise Average Case Complexity Measures | R. Reischuk | ICSI Technical Report TR-93-049 | August 1993 | ICSI Technical Reports | [PDF]
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| From AUDREY to Siri: Is Speech Recognition A Solved Problem? | R. Pieraccini | Presented at the Mobile Voice Conference, San Francisco, California | March 2012 | Speech | [PDF]
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| Usage Models of Classroom Computing in Developing Regions | R. Patra, J. Pal, S. Nedevschi, M. Plauche, and U.S. Pawar | Proceedings of International Conference on Information Technologies and Development (ICTD2007), IEEE Computer Society, Bangalore, India, pp. 158-167 | December 2007 | BCIS (archived) | [PDF]
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| The MASC Word Sense Corpus | R. Passonneau, C. Baker, C. Fellbaum, and N. Ide | Proceedings of the 8th Conference on International Language Resources and Evaluation (LREC 2012), Istanbul, Turkey, pp. 3025-3030 | May 2012 | AI | [PDF]
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| Characteristics of Internet Background Radiation | R. Pang, V. Yegneswaran, P. Barford, V. Paxson, and L. Peterson | Proceedings of the 2004 Internet Measurement Conference (IMC 2004), Taormina, Italy | October 2004 | Networking | [PDF]
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