Publication Search Results

Title	Author	Bibliographic	Date	Group	Links
A Simplex variant solving an m*d linear program in O(min(m2, d2)) expected number of pivot steps	I. Adler, R. M. Karp, and R. Shamir	Journal of Complexity, Vol. 3, No. 4, pp. 372-87	December 1987	Algorithms
A family of simplex variants solving an m*d linear program in expected number of pivot steps depending on d only	I. Adler, R. M. Karp, and R. Shamir	Mathematics of Operations Research, Vol. 11, No. 4, pp. 570-90	November 1986	Algorithms
Reconstructing Chain Functions in Genetic Networks	I. Gat-Viks, R. Shamir, R.M. Karp, and R. Sharan	Proceedings of the Ninth Pacific Symposium on Biocomputing (PSB'04), pp. 498-509	January 05 2004	Algorithms
Scoring Clustering Solutions by Their Biological Relevance	I. Gat-Viks, R. Sharan, and R. Shamir	Bioinformatics, 19,pp 2381-2389	2003	Algorithms
Incomplete Directed Perfect Phylogeny	I. Pe'er, T. Pupko, R. Shamir, and R. Sharan	SIAM Journal on Computing 33(3), pp. 590-607	January 05 2004	Algorithms
Detecting Disease-Specific Dysregulated Pathways Via Analysis of Clinical Expression Profiles	I. Ulitzky, R. M. Karp, and R. Shamir	Proceedings of 12th Annual International Conference on Research in Computational Molecular Biology (RECOMB 2008), Singapore, pp. 347-359	March 2008	Algorithms
Computing the Similarity of Two Sequences with Nested Arc Annotations	J. Alber, J. Gramm, J. Guo, and R. Niedermeier	Theoretical Computer Science, Vol. 312, Issues 2-3, pp. 337-358	January 2004	Algorithms
On the Power and Limits of Evolutionary Conservation -- Unraveling Bacterial Gene Regulatory Networks	J. Baumbach	Nucleic Acids Research, Vol. 38, No. 22, pp. 7877-7884	December 2010	Algorithms	[PDF]
Towards the Integrated Analysis, Visualization, and Reconstruction of Microbial Gene Regulatory Networks	J. Baumbach, S. Rahmann, and A. Tauch	Briefings in Bioinformatics, Vol. 10, Issue 1, pp. 75-83	January 2009	Algorithms	[PDF]
Reliable Transfer of Transcriptional Gene Regulatory Networks Between Taxonomically Related Organisms	J. Baumbach, S. Rahmann, and A. Tauch	BMC Systems Biology, Vol. 3, Issue 8	January 2009	Algorithms	[PDF]
Integrated Analysis and Reconstruction of Microbial Transcriptional Gene Regulatory Networks Using CoryneRegNet	J. Baumbach, T. Wittkop, C. K. Kleindt, and A. Tauch	Nature Protocols, Vol. 4, Issue 6, pp. 992-1005	June 2009	Algorithms
The Rank of Sparse Random Matrices Over Finite Fields	J. Blomer, R.M. Karp, and E. Welzl	Random Structures & Algorithms, July 1997, vol.10, (no.4):407-19.	July 1997	Algorithms
Tight Lower Bounds for the Asymetric k-Center Problem	J. Chuzhoy, S. Guha, E. Halperin, S. Khanna, G. Kortsarz and S. Naor	In Proceedings of the 36th Annual ACM Symposium on Theory of Computing (STOC04)	January 05 2004	Algorithms
Asymmetric K-Center Is Log* N-Hard to Approximate	J. Chuzhoy, S. Guha, E. Halperin, S. Khanna, G. Kortsarz, R. Krauthgamer, and J. Naor	Journal of the ACM, Vol. 52, Issue 4, pp. 538-551	July 2005	Algorithms
Theoretical improvements in algorithmic efficiency for network flow problems	J. Edmonds and R. M. Karp	Journal of the Association for Computing Machinery, Vol. 19, No. 2, p. 248-64	April 1972	Algorithms
Global Synchronization in Sensornets	J. Elson, R.M. Karp, C.H. Papadimitriou, and S. Shenker	Proceedings of LATIN, 609-624, 2004.	2004	Algorithms
Circuit placements and costs bounds by eigenvector decomposition	J. Frankle and R. M. Karp	Proceedings of the IEEE International Conference on Computer-Aided Design (ICCAD-86), A Conference for the EE CAD Professional. Digest of Technical Papers (Cat. No.86CH2353-1), Santa Clara, California, pp. 414-17	November 1986	Algorithms
A Polynomial-Time Algorithm for the Matching of Crossing Contact-Map Patterns	J. Gramm	Proceedings of the Fourth International Workshop on Algorithms in Bioinformatics (WABI 2004), Bergen, Norway	September 05 2004	Algorithms
Experimental Design for Multiplexed SNP Genotyping	J. Gramm, A. Ben-Dor, and R. Sharan	Manuscript	January 05 2004	Algorithms
Parameterized Intractability of Distinguishing Substring Selection	J. Gramm, J. Guo, and R. Niedermeier	Theory of Computing Systems	January 05 2004	Algorithms
Pattern Matching for Arc-Annotated Sequences	J. Gramm, J. Guo, and R. Niedermeier	Journal of Algorithms	January 05 2004	Algorithms
Graph-Modeled Data Clustering: Fixed-Parameter Algorithms for Clique Generation	J. Gramm, J. Guo, F. Hüffner, and R. Niedermeier	Theory of Computing Systems	January 05 2004	Algorithms
Automated Generation of Search Tree Algorithms for Hard Graph-Modification Problems	J. Gramm, J. Guo, F. Hüffner, and R. Niedermeier	Algorithmica, 39(4):321-347	January 05 2004	Algorithms
Perfect Path Phylogeny Haplotyping with Missing Data is Fixed-Parameter Tractable	J. Gramm, T. Nierhoff, and T. Tantau	Proceedings of the First International Workshop on Parameterized and Exact Computation (IWPEC 2004), Bergen, Norway	September 05 2004	Algorithms
On the Complexity of Haplotyping via Perfect Phylogeny	J. Gramm, T. Nierhoff, R. Sharan, and T. Tantau	Proceedings of the Second RECOMB Satellite Workshop on Computational Methods for SNPs and Haplotypes, pp. 35-46	January 05 2004	Algorithms
MotifAdjuster: A Tool for Computational Reassessment of Transcription Factor Binding Site Annotations	J. Keilwagen, J. Baumbach, T. Kohl, and I. Grosse	Genome Biology, Vol. 10, Issue 5, p. R46	May 2009	Algorithms	[PDF]
From Corynebacterium Glutamicum to Mycobacterium Tuberculosis - Towards Transfers of Gene Regulatory Networks and Integrated Data Analyses with MycoRegNet	J. Krawczyk, T. A. Kohl, A. Goesmann, J. Kalinowski, and J. Baumbach	Nucleic Acids Research, Vol. 37, No. 14, e97	August 2009	Algorithms	[PDF]
The Benefit of Migration in Parallel Evolutionary Algorithms	J. Laessig and D. Sudholt	Proceedings of the Genetic and Evolutionary Computation Conference (GECCO 2010), Portland, Oregon, pp. 1105-1112	July 2010	Algorithms
General Scheme for Analyzing Running Times of Parallel Evolutionary Algorithms	J. Laessig and D. Sudholt	Proceedings of the 11th International Conference on Parallel Problem Solving from Nature (PPSN 2010), Krakow, Poland, pp. 234-243	September 2010	Algorithms
Experimental Supplements to the Theoretical Analysis of Migration in the Island Model	J. Laessig and D. Sudholt	Proceedings of the 11th International Conference on Parallel Problem Solving from Nature (PPSN 2010), Krakow, Poland, pp. 224-233	September 2010	Algorithms
Adaptive Population Models for Offspring Populations and Parallel Evolutionary Algorithms	J. Laessig and D. Sudholt	Proceedings of the 11th Foundations of Genetic Algorithms Workshop (FOGA XI), pp. 181-192, Schwarzenberg, Austria	January 2011	Algorithms	[PDF]
New Approaches to Enterprise Cooperation Generation and Management	J. Laessig and U. Trommler	Proceedings of the 12th International Conference on Enterprise Information Systems (ICEIS 2010), Funchal, Portugal	June 2010	Algorithms
Self-Stabilization in Hierarchically Structured Energy Markets	J. Laessig, B. Satzger, and O. Kramer	Proceedings of the 8th International Conference on Information Technology: New Generations (ITNG 2011), pp. 803-809, Las Vegas, Nevada	April 2011	Algorithms
Aufträge, Partner, Kosten - Kooperation statt Konkurrenz	J. Lässig, S. Heinrich, and U. Trommler	IT&Production, Issue 10, pp. 74-76	November 2009	Algorithms
A Comparison of Phasing Algorithms for Trios and Unrelated Individuals	J. Marchini, D. Cutler, N. Patterson, M. Stephens, E. Eskin, E. Halperin, S. Lin, S. Qin, G. Abecassis, H. Munro, and P. Donnelly	American Journal of Human Genetics, Vol. 78, Issue 3, pp. 437-450	March 2006	Algorithms
Forecasting the Economy with Neural Nets: A Survey of Challenges and Solutions	J. Moody	Neural Networks: Tricks of the Trade, Genevieve B. Orr and Klaus-Robert Muller, eds., Springer Verlag, pp. 347-371, 1998.	1998	Algorithms
Macroeconomic Forecasting: Challenges and Neural Network Solutions	J. Moody	Proceedings of the International Symposium on Artificial Neural Networks, Hsinchu, Taiwan	1995	Algorithms
Prediction Risk and Neural Network Architecture Selection	J. Moody	From Statistics to Neural Networks: Theory and Pattern Recognition Applications, V. Cherkassky, J.H. Friedman, and H. Wechsler (eds), Springer-Verlag	1994	Algorithms
The Effective Number of Parameters: an Analysis of Generalization and Regularization in Nonlinear Learning Systems	J. Moody	Advances in Neural Information Processing Systems Vol. 4, Moody, Hanson, and Lippmann, eds., Morgan Kaufmann, Palo Alto, pp. 847-854	1992	Algorithms
Note on Generalization, Regularization, and Architecture Selection in Nonlinear Learning Systems	J. Moody	Proceedings of the First IEEE-SP Workshop on Neural Networks for Signal Processing, pp. 1-10	1991	Algorithms
Dynamics of Lateral Interaction Networks	J. Moody	Proceedings of the IEEE International Joint Conference on Neural Networks (IJCNN 1990), San Diego, California	1990	Algorithms
Fast Learning in Multi-Resolution Hierarchies	J. Moody	Advances in Neural Information Processing Systems, D. Touretzky, editor, Morgan Kauffmann	1989	Algorithms
Associative Memories	J. Moody	Chapter II 5, DARPA Neural Network Study Final Report, Richard Lippmann, ed.	1988	Algorithms
Perspectives on Associative Memories	J. Moody	Proceedings of the IEEE First International Conference on Neural Networks, pp. III-59	1987	Algorithms
Prospects for Axion Detection	J. Moody	Dark Matter in the Universe: Proceedings of IAU Symposium 117, Princeton, New Jersey	June 1985	Algorithms
Fast Learning in Networks of Locally-Tuned Processing Units	J. Moody and C. Darken	Neural Computation, Vol. 1, pp. 289-303	1989	Algorithms
Learning with Localized Receptive Fields	J. Moody and C. Darken	Proceedings of the 1988 Connectionist Models Summer School, Hinton, Sejnowski, and Touretzsky, eds. Morgan Kaufmann, pp. 133-143	1988	Algorithms
Term Structure of Interactions of Foreign Exchange Rates	J. Moody and H. Yang	Computational Finance 1999, edited by Y. S. Abu-Mostafa, B. LeBaron, A. W. Lo, and A. S. Weigend, MIT Press, Cambridge, MA, 2000.	2000	Algorithms
Architecture Selection Strategies for Neural Networks: Application to Corporate Bond Rating Prediction	J. Moody and J. Utans	Neural Networks in the Capital Markets, Refenes A. N. (ed), John Wiley & Sons, New York	1994	Algorithms
Principled Architecture Selection for Neural Networks: Application to Corporate Bond Rating Prediction	J. Moody and J. Utans	Advances in Neural Information Processing Systems, Vol. 4, Moody, Hanson, and Lippmann, eds., Morgan Kaufmann, Palo Alto	1992	Algorithms

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