Publication Search Results

Title	Author	Bibliographic	Date	Group	Links
Domination When the Stars Are Out	D. Hermelin, M. Mnich, E. J. van Leeuwen, and G. J. Woeginger	Proceedings of the 38th International Colloquium on Automata, Languages and Programming (ICALP 2011), pp. 432-473, Zurich, Switzerland	July 2011	Algorithms
Don’t Be Greedy When Calculating Hypervolume Contributions.	K. Bringmann and T. Friedrich.	Proceedings of the 10th Foundations of Genetic Algorithms Workshop (FOGA X), Orlando, Florida, pp. 103-112	January 2009	Algorithms	[PDF]
Dynamic Network Topology Changes in Functional Modules Predict Responses to Oxidative Stress in Yeast	P. V. Gopalacharyulu, V. R. Velagapudi, E. Lindfors, E. Halperin, and M. Orešič	Molecular BioSystems, Vol. 5, Issue 3, pp. 276-287	March 2009	Algorithms
Dynamic Portfolio Management with Transaction Costs	A. Suarez, J. Moody, and M. Saffell	Proceedings of the International Workshop on Advances in Machine Learning for Computational Finance, London, United Kingdom. Also presented at the Multidisciplinary Symposium on Reinforcement Learning, Montreal, Canada, June 2009	July 2009	Algorithms	[PDF]
Dynamic programming meets the principle of inclusion and exclusion	R. M. Karp	Operations Research Letters, Vol. 1, No. 2, pp. 49-51	April 1982	Algorithms
Dynamics of Lateral Interaction Networks	J. Moody	Proceedings of the IEEE International Joint Conference on Neural Networks (IJCNN 1990), San Diego, California	1990	Algorithms
E-QED: An Efficient Method for Interpreting eQTL Associations Using Protein Networks	S. Suthram, A. Beyer, R. M. Karp, Y. Eldar, and T. Ideker	Molecular Systems Biology, Vol. 4	March 2008	Algorithms
Effective Heuristics for NP-Hard Problems	R. M. Karp	Presented at the Michael Rabin Celebration, Cambridge, Massachusetts	August 2011	Algorithms
Efficient Algorithms for Detecting Signaling Pathways in Protein Interaction Networks	J. Scott, T. Ideker, R. M. Karp, and R. Sharan	Proceedings of the 9th Annual International Conference on Research in Computational Molecular Biology (RECOMB'05), Cambridge, Massachusetts, pp. 133-144	May 2005	Algorithms
Efficient Algorithms for Detecting Signaling Pathways in Protein Interaction Networks	J. Scott, T. Ideker, R. M. Karp, and R. Sharan	Journal of Computational Biology, Vol. 13, Issue 2 pp. 133-144	March 2006	Algorithms	[PDF]
Efficient Broadcast on Random Geometric Graphs	M. Bradonjić, R. Elsässer, T. Friedrich, T. Sauerwald, and A. Stauffer	Proceedings of the ACM-SIAM Symposium on Discrete Algorithms (SODA 2010), Austin, Texas, pp. 1412-1421	January 2010	Algorithms	[PDF]
Efficient Information Gathering on the Internet	O. Etzioni, S. Hanks, T. Jiang, R.M. Karp, and others	Proceedings. Thirty-Seventh Annual Symposium Foundations of Computer Science, 14-16 Oct. 1996. Los Alamitos, California, USA: IEEE Comput. Soc. Press, 1996. p. 234-43.	October 1996	Algorithms
Efficient PRAM Simulation on a Distributed Memory Machine	R.M. Karp, M. Luby, and F. Meyer auf der Heide	Algorithmica, Vol. 16, No. 4-5, pp. 517-42	October 1996	Algorithms
Efficient PRAM simulation on a distributed memory machine	R. M. Karp, M. Luby, and F. Meyer auf der Heide	Proceedings of the 24th Annual ACM Symposium on the Theory of Computing, Victoria, British Columbia, Canada, pp. 318-26	May 1992	Algorithms
Efficient randomized pattern-matching algorithms	R. M. Karp and M.O. Rabin	IBM Journal of Research and Development, Vol. 31, No. 2, pp. 249-60	March 1987	Algorithms
Efficient Reconstruction of Haplotype Structure Via Perfect Phylogeny	E. Eskin, E. Halperin, and R.M. Karp	Journal of Bioinformatics and Computational Biology (JBCB) 1(1) 1-20	2003	Algorithms
Efficiently Solvable Perfect Phylogeny Problems on Binary and k-State Data with Missing Values	K. Stephens and B. Kirkpatrick	Proceedings of the 11th Workshop on Algorithms in Bioinformatics (WABI 2011), Saarbrücken, Germany	September 2011	Algorithms
Emerging Opportunities for Theoretical Computer Science	A.V. Aho, D.S. Johnson, R.M. Karp, S.R. Kosaraju, and others	SIGACT News, Sept. 1997, vol.28, (no.3):65-74.	1997	Algorithms
Error-Resilient DNA Computation. Random Structures & Algorithms, Random Struct	R.M. Karp, C. Kenyon, and O. Waarts	Algorithms (USA), vol.15, (no.3-4), Wiley, Oct.-Dec. 1999. p.450-66. 19	October 1999	Algorithms
Estimating Haplotype Frequencies Efficiently	E. Halperin and E. Hazan	Proceedings of the 9th Annual International Conference on Research in Computational Molecular Biology (RECOMB'05), Cambridge, Massachusetts, pp. 553-568	May 2005	Algorithms
Estimating Local Ancestry in Admixed Populations	S. Sankararaman, S. Sridhar, G. Kimmel, and E. Halperin	The American Journal of Human Genetics, Vol. 82, Issue 2, pp. 290-303	February 2008	Algorithms	[PDF]
Experimental Design for Multiplexed SNP Genotyping	J. Gramm, A. Ben-Dor, and R. Sharan	Manuscript	January 05 2004	Algorithms
Experimental Supplements to the Theoretical Analysis of Migration in the Island Model	J. Laessig and D. Sudholt	Proceedings of the 11th International Conference on Parallel Problem Solving from Nature (PPSN 2010), Krakow, Poland, pp. 224-233	September 2010	Algorithms
Experiments on Curve Reconstruction	E. Althaus, K. Melhorn. S Naher, and S. Schirra	Proceedings of the Second Workshop Algorithm Engineering and Experiments (ALENEX00). Lecture Notes in Computer Science, Springer-Verlag, 2000.	2000	Algorithms
Failure correction techniques for large disk arrays	G.A. Gibson, L. Hellerstein, R. M. Karp, R.H. Katz, and D.A. Patterson	Proceedings of the Third International Conference on Architectural Support for Programming Languages and Operating Systems (ASPLOS-III), Boston, Massachusetts, pp.123-32	April 1989	Algorithms
Fair Bandwidth Allocation Without Per-Flow State	R. M. Karp	In Essays in Theoretical Computer Science in Memory of Shimon Even, O. Goldreich, A. L. Rosenberg, and A. L. Selman, eds., pp. 88-110, Springer	2006	Algorithms
Fast and Accurate Inference of Local Ancestry in Latino Populations	Y. Baran, B. Pasaniuc, S. Sankararaman, D. G. Torgerson, C. Gignoux, C. Eng, W. Rodriguez-Cintron, R. Chapela, J. G. Ford, P. C. Avila, J. Rodriguez-Santana, E. G. Burchard, and E. Halperin	Bioinformatics, Vol. 28, Issue 10, pp. 1359-1367	May 2012	Algorithms	[PDF]
Fast and Intuitive Clustering of Web Documents	O. Zamir, O. Etzioni, O. Madani, and R.M. Karp	Proceedings of the Third International Conference on Knowledge Discovery and Data Mining. 14-17 Aug. 1997. Edited by: Heckerman, D.; Mannila, H.; Pregibon, D.; Uthurusamy, R. Menlo Park, CA, USA: AAAI Press, 1997. p. 287-90.	August 1997	Algorithms
Fast Learning in Multi-Resolution Hierarchies	J. Moody	Advances in Neural Information Processing Systems, D. Touretzky, editor, Morgan Kauffmann	1989	Algorithms
Fast Learning in Networks of Locally-Tuned Processing Units	J. Moody and C. Darken	Neural Computation, Vol. 1, pp. 289-303	1989	Algorithms
Fast Pruning Using Principal Components	A.U. Levin, T.K. Leen, and J.E. Moody	Advances in Neural Information Processing Systems, Vol. 6, Cowan, Tesauro, and Alspector (eds), Morgan Kaufmann Publishers, San Mateo, California	1994	Algorithms
Fast, Adaptive K-Means Clustering: Some Empirical Results	C. Darken and J. Moody	Proceedings of the IEEE International Joint Conference on Neural Networks (IJCNN 1990), San Diego, California	1990	Algorithms
Faster and More Accurate Sequence Alignment with SNAP	M. Zaharia, W. J. Bolosky, K. Curtis, A. Fox, D. Patterson, S. Shenker, I. Stoica, R. M. Karp, and T. Sittler	arXiv.org under arXiv:1111.5572v1	November 2011	Algorithms	[PDF]
Feature Selection Based on Joint Mutual Information	H. Yang and J. Moody	Advances in Intelligent Data Analysis (AIDA), Computational Intelligence Methods and Applications (CIMA), International Computer Science Conventions, Rochester, New York, June 22-25, 1999.	June 1999	Algorithms
Feature Selection for High-Dimensional Genomic Microarray Data	E. P. Xing, M. I. Jordan, and R. M. Karp	Proceedings of the 18th International Conference on Machine Learning (ICML 2001), Williamstown, Massachusetts, pp. 601-608	June 2001	Algorithms	[PDF]
FED bin packing for item sizes with distributions on (0,1/2)	S. Floyd and R. M. Karp	Proceedings of the 27th Annual Symposium on Foundations of Computer Science (Cat. No. 86CH2354-9), Toronto, Ontario, Canada, pp. 322-30	October 1986	Algorithms
FFD bin packing for item sizes with uniform distributions on (0, 1/2)	S. Floyd and R. M. Karp	Algorithmica, Vol. 6, No. 2, pp. 222-40	1991	Algorithms
Filamentary Galaxy Clustering: A Mapping Algorithm	J. Moody, E.L. Turner, and J.R. Gott III	Astrophysical Journal, Vol. 273, pp. 16-23	October 1983	Algorithms
Finite-Length Analysis of LT-codes	R.M. Karp, M. Luby, and A. Shokrollahi	Proceedings of International Symposium on Information Theory (ISIT)	January 05 2004	Algorithms
Fixed Parameter Tractability of Binary Near-Perfect Phylogenetic Tree Reconstruction	G.E. Blelloch, K. Dhamdhere, E. Halperin, R. Ravi, R. Schwartz, and S. Sridhar	Proceedings of the 33rd International Colloquium on Automata, Languages, and Programming (ICALP 2006), Venice, Italy, pp. 667-678	July 2006	Algorithms
Forecasting the Economy with Neural Nets: A Survey of Challenges and Solutions	J. Moody	Neural Networks: Tricks of the Trade, Genevieve B. Orr and Klaus-Robert Muller, eds., Springer Verlag, pp. 347-371, 1998.	1998	Algorithms
From Corynebacterium Glutamicum to Mycobacterium Tuberculosis - Towards Transfers of Gene Regulatory Networks and Integrated Data Analyses with MycoRegNet	J. Krawczyk, T. A. Kohl, A. Goesmann, J. Kalinowski, and J. Baumbach	Nucleic Acids Research, Vol. 37, No. 14, e97	August 2009	Algorithms	[PDF]
General Lower Bounds for the Running Time of Evolutionary Algorithms	D. Sudholt	Proceedings of the 11th International Conference on Parallel Problem Solving from Nature (PPSN 2010), Krakow, Poland, pp. 124-133	September 2010	Algorithms	[PDF]
General Scheme for Analyzing Running Times of Parallel Evolutionary Algorithms	J. Laessig and D. Sudholt	Proceedings of the 11th International Conference on Parallel Problem Solving from Nature (PPSN 2010), Krakow, Poland, pp. 234-243	September 2010	Algorithms
Generalization Error Bounds Using Unlabeled Data	M. Kaariainen	Proceedings of the 18th Annual Conference on Learning Theory (COLT 2005), Bertinoro, Italy, pp. 127-142	June 2005	Algorithms
Genetic Variants at 6p21.33 Are Associated with Susceptibility to Follicular Lymphoma	C. F. Skibola, P. M. Bracci, E. Halperin, L. Conde, D. W. Craig, L. Agana, K. Iyadurai, N. Becker, A. Brooks-Wilson, J. D. Curry, J. J. Spinelli, E. A. Holly, J. Riby, L. Zhang, A. Nieters, M. T. Smith, and K. M. Brown	Nature Genetics, Vol. 41, No. 8, pp. 873-875	August 2009	Algorithms	[PDF]
Genome-Wide Association Data Reveal a Global Map of Genetic Interaction Among Protein Complexes	G. Hannum., R. Srivas., A. Guénolé, H. van Attikum, N. J. Krogan, R. M. Karp, and T. Ideker	PLoS Genetics, Vol. 5, Issue 12, e1000782	December 2009	Algorithms	[PDF]
Genome-Wide Association Data Reveal a Global Map of Genetic Interactions among Protein Complexes	R. Srivas, G. Hannum, A. Guénolé, H. van Attikum, N. J. Krogan, R. M. Karp, and T. Ideker	Presented at the 18th Annual International Conference on Intelligent Systems for Molecular Biology (ISMB 2010), Boston, Massachusetts	July 2010	Algorithms
Genome-Wide Association Study of Follicular Lymphoma Identifies a Risk Locus at 6p21.32	L. Conde, E. Halperin, N. K. Akers, K. M. Brown, K. E. Smedby, N. Rothman, et al.	Nature Genetics, Vol. 42, No. 8, pp. 661-664. DOI:10.1038/ng.626	August 2010	Algorithms
Genome-Wide In-silico Determination of Transcriptional Regulation Modules Controlling Cell Cycle in Human Cells	R. Elkon, C. Linhart, R. Sharan, R. Shamir, and Y. Shiloh	Genome Research, 13, pp. 773-780	2003	Algorithms

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