| On Linear Characterizations of Combinatorial Optimization Problems | R. M. Karp and C.H. Papadimitriou | Proceedings of the 21st Annual IEEE Symposium on Foundations of Computer Science, Syracuse, New York, pp. 1-9 | October 1980 | Algorithms | |
| Random Walks, Universal Traversal Sequences, and the Complexity of Maze Problems | R. Aleliunas, R. M. Karp, R.J. Lipton, and L. Lovasz | Proceedings of the Computer Science and Statistics 12th Annual Symposium on the Interface, Waterloo, Ontario, Canada, pp. 174-6 | May 1979 | Algorithms | |
| Random Walks, Universal Traversal Sequences, and the Complexity of Maze Problems | R. Aleliunas, R. M. Karp, R.J. Lipton, L. Lovasz, and C. Rackoff | Proceedings of the 20th Annual IEEE Symposium of Foundations of Computer Science, San Juan, Puerto Rico, pp. 218-23 | October 1979 | Algorithms | |
| A Patching Algorithm for the Nonsymmetric Traveling-salesman Problem | R. M. Karp | SIAM Journal on Computing, Vol. 8, No. 4, pp. 561-73 | November 1979 | Algorithms | |
| Recent Advances in the Probabilistic Analysis of Graph-theoretic Algorithms | R. M. Karp, Edited by: Maurer, H.A. | Automata, Languages and Programming, Graz, Austria, Springer-Verlag, pp. 338-9 | July 1979 | Algorithms | |
| Probabilistic Analysis of Graph-theoretic Algorithms | R. M. Karp | Proceedings of the Computer Science and Statistics 12th Annual Symposium on the Interface, Waterloo, Ontario, pp. 173 | May 1979 | Algorithms | |
| A Characterization of the Minimum Cycle Mean in a Digraph | R. M. Karp | Discrete Mathematics (Netherlands), Vol. 23, No. 3, pp. 309-11 | September 1978 | Algorithms | |
| Probabilistic Analysis of Partitioning Algorithms for the Traveling-salesman Problem in the Plane | R. M. Karp | Mathematics of Operations Research, Vol. 2, No. 3, pp. 209-24 | August 1977 | Algorithms | |
| On the Optimality of Huffman Trees | R. M. Karp and C.R. Glassey | SIAM Journal on Applied Mathematics, Vol. 31, No. 2, pp. 368-78 | September 1976 | Algorithms | |
| Probabilistic Behavior of a Naive Coloring Algorithm on Random Graphs | R. M. Karp and D.W. Matula | Bulletin of the Operations Research Society of America, Vol. 23, supplement 2. Also in the proceedings of the ORSA/TIMS National Meeting (Abstracts only), Las Vegas, Nevada, pp. B264 | 1975 | Algorithms | |
| Near-optimal Solutions to a 2-dimensional Placement Problem | R. M. Karp, A.C. McKellar, and C.K. Wong | SIAM Journal on Computing, Vol. 4, No. 3, pp. 271-86 | September 1975 | Algorithms | |
| Two Special Cases of the Assignment Problem | R. M. Karp and S. Li | Discrete Mathematics (Netherlands), Vol. 13, No. 2, pp. 129-42 | October 1975 | Algorithms | |
| On the Optimality of Huffman Trees | R. M. Karp and C.R. Glassey | Report number ORC-74-21, University of California, Berkeley, California | June 1974 | Algorithms | |
| On the Computational Complexity of Combinatorial Problems | R. M. Karp | Networks, Vol. 5, No.1. Also in the Proceedings of the Symposium on Large-Scale Networks, Evanston, Illinois, pp. 45-68, April 1974 | January 1975 | Algorithms | |
| An n5/2 Algorithm for Maximum Matchings in Bipartite Graphs | R. M. Karp and J.E. Hopcroft | SIAM Journal on Computing, Vol. 2, No. 4, pp. 225-31 | December 1973 | Algorithms | |
| Theoretical improvements in algorithmic efficiency for network flow problems | J. Edmonds and R. M. Karp | Journal of the Association for Computing Machinery, Vol. 19, No. 2, p. 248-64 | April 1972 | Algorithms | |
| A Phenomenon in the Theory of Sorting | D. Gale and R. M. Karp | Journal of Computer and System Sciences, Vol. 6, No. 2, p. 103-15 | April 1972 | Algorithms | |
| Inference and Analysis of Haplotypes from Combined Genotyping Studies Deposited in dbSNP | N.A. Zaitlen, H.M. Kang, M.L. Feolo, S.T. Sherry, E. Halperin, and E. Eskin | Genome Research, Vol. 15, No. 11, pp.1594-1600 | October 2005 | Algorithms | |
| A Computational Model of Tractable Reasoning -- Taking Inspiration from Cognition | L. Shastri | Proceedings of the 13th International Joint Conference on Artificial Intelligence (IJCAI 93), France, pp. 202-207 | 1993 | Algorithms | |
| Asymmetric K-Center Is Log* N-Hard to Approximate | J. Chuzhoy, S. Guha, E. Halperin, S. Khanna, G. Kortsarz, R. Krauthgamer, and J. Naor | Journal of the ACM, Vol. 52, Issue 4, pp. 538-551 | July 2005 | Algorithms | |
| The Minimum-Entropy Set Cover Problem | E. Halperin and R. M. Karp | Theoretical Computer Science, Vol. 348, Issue 2, pp. 240-250 | December 2005 | Algorithms | |
| A Probabilistic Model for the Survivability of Cells | I. Adler, H-S Ahn, R. M. Karp, and S.M. Ross | Journal of Applied Probability, Vol. 42, No. 4, pp. 919-931 | December 2005 | Algorithms | |
| A Note on Optimally Phasing Long Genomic Regions Using Local Haplotype Predictions | E. Eskin, E. Halperin, and R. Sharan | Journal of Bioinformatics and Computational Biology, Vol. 4, No. 3, pp. 639-647 | June 2006 | Algorithms | |
| Haplofreq - Estimating Haplotype Frequencies Efficiently | E. Halperin and E. Hazan | Proceedings of the 9th Annual International Conference on Research in Computational Molecular Biology (RECOMB'05), Cambridge, Massachusetts, pp. 553-568 | May 2005 | Algorithms | |
| Generalization Error Bounds Using Unlabeled Data | M. Kaariainen | Proceedings of the 18th Annual Conference on Learning Theory (COLT 2005), Bertinoro, Italy, pp. 127-142 | June 2005 | Algorithms | |
| A Comparison of Tight Generalization Error Bounds | M. Kaariainen and J. Langford | Proceedings of the 22nd International Conference on Machine Learning (ICML 2005), Bonn, Germany, pp. 409-416 | August 2005 | Algorithms | |
| On Active Learning in the Non-Realizable Case | M. Kaariainen | Proceedings of the Foundations of Active Learning Workshop at the 19th Annual Conference on Neural Information Processing Systems (NIPS), Vancouver, Canada | December 2005 | Algorithms | |
| Lower Bounds for Reductions | M. Kaariainen and J. Langford | Presented at the Atomic Learning Workshop, Chicago, Illinois | March 2006 | Algorithms | |
| Optimal Flow Distribution Among Multiple Channels with Unknown Capacities | R. M. Karp, T. Nierhoff, and T. Tantau | Theoretical Computer Science: Essays in Memory of Shimon Even, O. Goldreich, A. L. Rosenberg, and A. L. Selman, eds., Lecture Notes in Computer Science, Vol. 3895, pp. 111-128, Springer-Verlag | 2006 | Algorithms | [PDF]
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| Fair Bandwidth Allocation Without Per-Flow State | R. M. Karp | In Essays in Theoretical Computer Science in Memory of Shimon Even, O. Goldreich, A. L. Rosenberg, and A. L. Selman, eds., pp. 88-110, Springer | 2006 | Algorithms | |
| Optimization Problems Related to Internet Congestion Control | R. M. Karp | Graph Theory, Combinatorics and Algorithms: Interdisciplinary Applications, M.C. Golumbic and I.B.-A. Hartman, eds., Springer-Verlag, New York | 2005 | Algorithms | |
| George Dantzig's Impact on the Theory of Computation | R. M. Karp | Discrete Optimization, Vol. 5, Issue 2, pp. 174-185 | May 2006 | Algorithms | |
| Report of the SIGACT Committee on funding for Theoretical Computer Science | R. M. Karp | SIGACT (Special Interest Group on Algorithms and Computation Theory) News | December 2005 | Algorithms | |
| A Comparison of Phasing Algorithms for Trios and Unrelated Individuals | J. Marchini, D. Cutler, N. Patterson, M. Stephens, E. Eskin, E. Halperin, S. Lin, S. Qin, G. Abecassis, H. Munro, and P. Donnelly | American Journal of Human Genetics, Vol. 78, Issue 3, pp. 437-450 | March 2006 | Algorithms | |
| Active Learning Under Arbitrary Distributions | C. Monteleoni and M. Kaariainen | Poster at the Value of Information in Inference, Learning, and Decision-Making Workshop at the 19th Annual Conference on Neural Information Processing Systems (NIPS), Vancouver, Canada | December 2005 | Algorithms | |
| Knowledge Discovery for Time Series | M. Saffell | Ph.D. Thesis, OGI School of Science and Engineering, Oregon Health and Science University | September 2005 | Algorithms | |
| Efficient Algorithms for Detecting Signaling Pathways in Protein Interaction Networks | J. Scott, T. Ideker, R. M. Karp, and R. Sharan | Proceedings of the 9th Annual International Conference on Research in Computational Molecular Biology (RECOMB'05), Cambridge, Massachusetts, pp. 133-144 | May 2005 | Algorithms | |
| Conserved Patterns of Protein Interaction in Multiple Species | R. Sharan, S. Sutharan, R. Kelley, T. Kuhn, S. McCuine, T.Sittler, R. Karp, and T. Ideker | Proceedings of National Academy of Science, Vol. 102, Issue 6, pp. 1974-1979 | February 2005 | Algorithms | [PDF]
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| Fixed Parameter Tractability of Binary Near-Perfect Phylogenetic Tree Reconstruction | G.E. Blelloch, K. Dhamdhere, E. Halperin, R. Ravi, R. Schwartz, and S. Sridhar | Proceedings of the 33rd International Colloquium on Automata, Languages, and Programming (ICALP 2006), Venice, Italy, pp. 667-678 | July 2006 | Algorithms | |
| Leveraging the HapMap Correlation Structure in Association Studies | N. Zaitlen, H. M. Kang, E. Eskin, and E. Halperin | American Journal of Human Genetics, Vol. 80, Issue 4, pp. 683-691 | April 2007 | Algorithms | [PDF]
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| An Efficient and Accurate Graph-based Approach to Detect Population Substructure | S. Sridhar, S. Rao, and E. Halperin | Proceedings of the 11th Annual International Conference on Research in Computational Molecular Biology (RECOMB 2007), Oakland, California, pp. 503-517 | April 2007 | Algorithms | [PDF]
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| Using DNA Pools for Genotyping Trios | K.B. Beckman, K.A. Abel, A. Braun, and E. Halperin | Nucleic Acids Research, Vol. 34, No. 19, electronic article no. 129 | November 2006 | Algorithms | [PDF]
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| A Rigorous Analysis of Population Stratification with Limited Data | K. Chaudhuri, E. Halperin, S. Rao, and S. Zhou | Proceedings of ACM-SIAM Symposium on Discrete Algorithms (SODA), New Orleans, Louisiana, pp. 1046-1055 | January 2007 | Algorithms | [PDF]
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| LAMP: Local Ancestry in adMixed Populations | S. Sankararaman, S. Sridhar, G. Kimmel, and E. Halperin | American Journal of Human Genetics, Vol. 82, Issue 2, American Society of Human Genetics, pp. 290-303 | February 2008 | Algorithms | |
| Polymorphisms in the Estrogen Receptor 1 and Vitamin C and Matrix Metalloproteinase Gene Families Are Associated with Susceptibility to Lymphoma | C. F. Skibola, P. M. Bracci, E. Halperin, A. Nieters, A. Hubbard, R. A. Paynter, D. R. Skibola, A. Agana, N. Becker, P. Tessler, M. S. Forrest, S. Sankararaman, L. Conde, E. A. Holly, and M. T. Smith | PLoS ONE, Vol. 3, Issue 7, e2816 | June 2008 | Algorithms | [PDF]
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| On the Inference of Ancestries in Admixed Populations | S. Sankararaman, G. Kimmel, E. Halperin and M. I. Jordan | Genome Research, Vol 18, Issue 4, pp. 668-675 | April 2008 | Algorithms | [PDF]
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| Average Update Times for Fully-Dynamic All-Pairs Shortest Paths | T. Friedrich and N. Hebbinghaus | Proceedings of International Symposium on Algorithms and Computation (ISAAC), Gold Coast, Australia, pp. 693-704 | December 2008 | Algorithms | [PDF]
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| Approximating the Volume of Unions and Intersections of High-Dimensional Geometric Objects | K. Bringmann and T. Friedrich | Proceedings of International Symposium on Algorithms and Computation (ISAAC), Gold Coast, Australia, pp. 436-447 | December 2008 | Algorithms | [PDF]
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| Computing Single Source Shortest Paths Using Single-Objective Fitness Functions | S. Baswana, S. Biswas, DB. Doerr, T. Friedrich, P. Kurur, and F. Neumann | Proceedings of the 10th Foundations of Genetic Algorithms Workshop (FOGA X), Orlando, Florida, pp. 59-66 | January 2009 | Algorithms | [PDF]
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| Quasirandom Rumor Spreading: An Experimental Analysis | B. Doerr, T. Friedrich, M. Künneman, and T. Sauerwald | Proceedings of the Workshop on Algorithm Engineering and Experiments (ALENEX09), New York, New York, pp. 145-153 | January 2009 | Algorithms | [PDF]
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