| Robust Convergence in Pulse Coupled Oscillators with Delays | J. Nishimura and E. Friedman | In Physical Review Letters, Vol. 106, No. 19, DOI:10.1103/PhysRevLett.106.194101 | May 2011 | Algorithms | |
| Comparative Study of Different Approaches to Particle Swarm Optimization in Theory and Practice | S. Thiem and J. Laessig | In Particle Swarm Optimization: Theory, Techniques and Applications, A. E. Olsson, ed., Nova Science Publishers, ISBN: 978-1-61668-527-0 | 2010 | Algorithms | |
| On the Reducibility of Sets Inside with Low Information Content | M. Ogihara and T. Tantau | In JCSS | January 05 2004 | Algorithms | |
| Fair Bandwidth Allocation Without Per-Flow State | R. M. Karp | In Essays in Theoretical Computer Science in Memory of Shimon Even, O. Goldreich, A. L. Rosenberg, and A. L. Selman, eds., pp. 88-110, Springer | 2006 | Algorithms | |
| Three Combinatorial Problems in Computational and Genomic Biology | R. Karp | IFORS Distinguished Lecture at the Joint International Meeting of the Canadian Operational Research Society and the Institute for Operations Research and the Management Sciences (CORS-INFORMS International), Toronto, Canada | June 2009 | Algorithms | |
| Algorithms to Detect Multiprotein Modularity Conserved During Evolution | L. Hodgkinson and R. M. Karp | IEEE/ACM Transactions on Computational Biology and Bioinformatics, PMID: 21968956 | September 2011 | Algorithms | [PDF]
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| Learning to Trade via Direct Reinforcement | J. Moody and M. Saffell | IEEE Transactions on Neural Networks, Vol. 12, No. 4, July 2001. | July 2001 | Algorithms | |
| Predicting Blood Glucose Metabolism in Diabetics -- A Machine Learning Solution | V. Tresp, T. Briegel, and J. Moody | IEEE Transactions on Neural Networks, v. 10, n. 5, pp. 1204--1213, 1999. | 1999 | Algorithms | |
| Probabilistic Analysis of Linear Programming Decoding | C. Daskalakis, A. G. Dimakis, R. M. Karp, and M. J. Wainwright | IEEE Transactions on Information Theory, Vol. 54, Issue 8, pp. 3565-3578 | August 2008 | Algorithms | |
| On the Effects of Adding Objectives to Plateau Functions | D. Brockhoff, T. Friedrich, N. Hebbinghaus, C. Klein, F. Neumann, and E. Zitzler | IEEE Transactions on Evolutionary Computation, Vol. 13, Issue 3, pp. 591-603 | June 2009 | Algorithms | [PDF]
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| An information entropy approach to the small-lot concept | B. Ronen and R. M. Karp | IEEE Transactions on Engineering Management, Vol. 41, No. 1, p. 89-92 | February 1994 | Algorithms | |
| Efficient randomized pattern-matching algorithms | R. M. Karp and M.O. Rabin | IBM Journal of Research and Development, Vol. 31, No. 2, pp. 249-60 | March 1987 | Algorithms | |
| Neural Networks for Time Series Analysis | Y Liao, J. Moody, and L. Wu | Handbook on Neural Network Signal Processing, edited by Y-H Hu and J-N Hwang, CRC Press 2001. | 2002 | Algorithms | |
| Optimization Problems Related to Internet Congestion Control | R. M. Karp | Graph Theory, Combinatorics and Algorithms: Interdisciplinary Applications, M.C. Golumbic and I.B.-A. Hartman, eds., Springer-Verlag, New York | 2005 | Algorithms | |
| Adiabatic Effective Lagrangian | J. Moody, A. Shapere, and F. Wilczek | Geometric Phases in Physics, edited by A. Shapere and F. Wilczek, World Scientific Publishing Co. | 1989 | Algorithms | |
| A Search for Overlapping Genetic Susceptibility Loci Between Non-Hodgkin Lymphoma and Autoimmune Diseases | L. Conde, P. M. Bracci, E. Halperin, and C. F. Skibola | Genomics, Vol. 98, No. 1, pp. 9-14 | July 2011 | Algorithms | |
| Inference and Analysis of Haplotypes from Combined Genotyping Studies Deposited in dbSNP | N.A. Zaitlen, H.M. Kang, M.L. Feolo, S.T. Sherry, E. Halperin, and E. Eskin | Genome Research, Vol. 15, No. 11, pp.1594-1600 | October 2005 | Algorithms | |
| On the Inference of Ancestries in Admixed Populations | S. Sankararaman, G. Kimmel, E. Halperin and M. I. Jordan | Genome Research, Vol 18, Issue 4, pp. 668-675 | April 2008 | Algorithms | [PDF]
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| Genome-Wide In-silico Determination of Transcriptional Regulation Modules Controlling Cell Cycle in Human Cells | R. Elkon, C. Linhart, R. Sharan, R. Shamir, and Y. Shiloh | Genome Research, 13, pp. 773-780 | 2003 | Algorithms | |
| MotifAdjuster: A Tool for Computational Reassessment of Transcription Factor Binding Site Annotations | J. Keilwagen, J. Baumbach, T. Kohl, and I. Grosse | Genome Biology, Vol. 10, Issue 5, p. R46 | May 2009 | Algorithms | [PDF]
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| A Generic Coalescent-Based Framework for the Selection of a Reference Panel for Imputation | B. Pasanuic, R. Avinery, T. Gur, C. F. Skibola, P. M. Bracci, and E. Halperin | Genetic Epidemiology, Vol. 34, Issue 8, pp. 773-782 | December 2010 | Algorithms | [PDF]
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| Detecting Excess Radical Replacements in Phylogenetic Trees | T. Pupko, R. Sharan, M. Hasegawa, R. Shamir, and D. Graur | Gene, 319, pp. 127-135 | 2003 | Algorithms | |
| Asymmetric Cost Sharing Mechanisms | E. Friedman | Games and Economic Behavior, available at http://dx.doi.org/10.1016/j.geb.2011.09.009 | October 2011 | Algorithms | |
| Prediction Risk and Neural Network Architecture Selection | J. Moody | From Statistics to Neural Networks: Theory and Pattern Recognition Applications, V. Cherkassky, J.H. Friedman, and H. Wechsler (eds), Springer-Verlag | 1994 | Algorithms | |
| Improved Approximation Algorithms for the Partial Vertex Cover Problem | E. Halperin and R. Srinivasan | Fifth International Workshop on Approximation Algorithms for Combinatorial Optimization, (APPROX), 185-199, Springer, 2002. | 2002 | Algorithms | |
| Hardness of Approximation for Vertex-Connectivity Network Design Problems | G. Kortsarz, R. Krauthgamer, and J.R. Lee | Fifth International Workshop on Approximation Algorithms for Combinatorial Optimization (APPROX), 185-199, Springer, 2002. | 2002 | Algorithms | |
| Approximating Covering Problems by Randomized Search Heuristics using Multi-Objective Models | T. Friedrich, J. He, N. Hebbinghaus, F. Neumann, and C. Witt | Evolutionary Computation, Vol. 18, No. 4, pp. 617-633, Winter 2010 | December 2010 | Algorithms | [PDF]
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| Analysis of an Asymmetric Mutation Operator | T. Jansen and D. Sudholt | Evolutionary Computation, Vol. 18, No. 1, pp. 1-26 | January 2010 | Algorithms | |
| Analysis of Diversity-Preserving Mechanisms for Global Exploration | T. Friedrich, P. S. Oliveto, D. Sudholt, and C. Witt | Evolutionary Computation, Vol. 17, Issue 4, pp. 455-476, Winter 2009 | December 2009 | Algorithms | [PDF]
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| Online Scheduling for Sorting Buffers | H. Racke, C. Sohler, and M. Westermann | European Symposium on Algorithms, 820-832, 2002. | 2002 | Algorithms | |
| Algorithms to Detect Multi-Protein Modularity Conserved During Evolution | L. Hodgkinson and R. M. Karp | EECS Department, UC Berkeley Technical Report No. UCB/EECS-2011-7, Berkeley, California | January 2011 | Algorithms | |
| Large-Scale Recovery of Haplotypes from Genotype Data Using Imperfect Phylogeny | E. Halperin and E. Eskin | EECS Department, UC Berkeley Technical Report No. UCB/CSD-1-1196, Berkeley, California | August 2002 | Algorithms | [PDF]
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| Large-Scale Reconstruction of Haplotype Structure via Perfect Phylogeny | E. Eskin, E. Halperin, and R.M. Karp | EECS Department, UC Berkeley Technical Report No. UCB/CSD 2-1196, Berkeley, California | August 2002 | Algorithms | [PDF]
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| Algorithms for Graph Partitioning on the Planted Partition Model. (Randomization, Approximation, and Combinatorial Optimization. Algorithms and Techniques.) | A. Condon and R.M. Karp | Edited by: Hochbaum, D., Jansen, K., Rolim, J.D.P., Sinclair, A. Berlin, Germany: Springer-Verlag, 1999. pp. 221-32, ix+287 pp. 14 | 1999 | Algorithms | |
| Multiple Sequence Alighment with Arbitrary Gap Costs: Computing an Optimal Solution Using Polydhedral Combinatorics | E. Althaus, A. Caprara, H.P. Lenhof, and K. Reinert | ECCB, 4-16, 2002. | 2002 | Algorithms | |
| George Dantzig's Impact on the Theory of Computation | R. M. Karp | Discrete Optimization, Vol. 5, Issue 2, pp. 174-185 | May 2006 | Algorithms | |
| A Characterization of the Minimum Cycle Mean in a Digraph | R. M. Karp | Discrete Mathematics (Netherlands), Vol. 23, No. 3, pp. 309-11 | September 1978 | Algorithms | |
| Two Special Cases of the Assignment Problem | R. M. Karp and S. Li | Discrete Mathematics (Netherlands), Vol. 13, No. 2, pp. 129-42 | October 1975 | Algorithms | |
| An introduction to randomized algorithms | R. M. Karp | Discrete Applied Mathematics, Vol. 34, No. 1-3. Also in the proceedings of the Capital City Conference on Combinatorics and Theoretical Computer Science, Washington, D.C., pp. 165-201 | November 21 1991 | Algorithms | |
| Subtree isomorphism is in random NC | P.B. Gibbons, R. M. Karp, G.L. Miller, and D. Soroker | Discrete Applied Mathematics, Vol. 29, No. 1, pp. 35-62 | November 1990 | Algorithms | |
| Average-Case Analysis of Incremental Topological Ordering | D. Ajwani and T. Friedrich | Discrete Applied Mathematics, Vol. 158, Issue 4, pp. 240-250 | February 2010 | Algorithms | [PDF]
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| Graph Traversals, Genes and Matroids: An Efficient Case of the Travelling Salesman Problem. | D. Gusfield, R.M. Karp, L. Wang, and P. Stelling | Discrete Applied Mathematics, 9 Nov. 1998, vol.88, (no.1-3):167-80. | 1998 | Algorithms | |
| Optimal Fully Dynamic Algorithms for Cograph Recognition | R. Shamir and R. Sharan | Discrete Applied Mathematics 136, pp. 329-340 | January 05 2004 | Algorithms | |
| Parametric Shortest Path Algorithms with an Application to Cyclic Staffing | R. M. Karp and J.B. Orlin | Discrete Applied Mathematics (Netherlands), Vol. 3, No. 1, pp. 37-45 | February 1981 | Algorithms | |
| Cluster Graph Modification Problems | R. Shamir, R. Sharan, and D. Tsur | Discrete Applied Mathematics | January 05 2004 | Algorithms | |
| Optimization of Trading Systems and Portfolios | J. Moody and L. Wu | Decision Technologies for Financial Engineering, Y. Abu-Mostafa, A. N. Refenes, and A. S. Weigend, eds., World Scientific, London, 1997. | 1997 | Algorithms | |
| What is the True Price? -- State Space Models for High Frequency FX Rates | J. Moody and L. Wu | Decision Technologies for Financial Engineering, Y. Abu-Mostafa, A. N. Refenes, and A. S. Weigend, eds., World Scientific, London, 1997. | 1997 | Algorithms | |
| Reinforcement Learning for Trading Systems and Portfolios | J. Moody, M. Saffell, Y. Liao, and L. Wu | Decision Technologies for Computational Finance, Proceedings of the London Conference, A.N. Refenes, N. Burgess and J. Moody, eds., Kluwer Financial Publishing, 1998. | 1998 | Algorithms | |
| Prospects for Axion Detection | J. Moody | Dark Matter in the Universe: Proceedings of IAU Symposium 117, Princeton, New Jersey | June 1985 | Algorithms | |
| Neural Network Modeling of Physiological Processes | V. Tresp, J. Moody, and W.R. Delong | Computational Learning Theory and Natural Learning Systems, Vol. 2, T. Petsche, M. Kearns, S. Hanson, R. Rivest (eds), MIT Press, pp. 363-378 | 1993 | Algorithms | |
